PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027180110.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 195aa MW: 22670.6 Da PI: 4.8391

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027180110.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	107.3	1.8e-33	8	126	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGf+FhPtdeel+ ++L++kv++ +++ ++i+e+d+++++Pw+L++k+ ++++wyfFs+ + rat++g W++ d++++++ XP_027180110.1 8 LPPGFHFHPTDEELIGYFLHRKVTNLPCNP-SIIPELDLCSTDPWELNEKALMSQNQWYFFSQVIQ--------GRATEKGHWEELDMDEDIVTS 93 79***********************999.89**********977778899**9755........699************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 g++ g+kk vf + +k +t+Wvm+ey+l XP_027180110.1 94 AGKKLGIKKYWVFCIDQVQKRIQTNWVMEEYHL 126 **********9999999********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MGDSRIILPP GFHFHPTDEE LIGYFLHRKV TNLPCNPSII PELDLCSTDP WELNEKALMS 60 QNQWYFFSQV IQGRATEKGH WEELDMDEDI VTSAGKKLGI KKYWVFCIDQ VQKRIQTNWV 120 MEEYHLFKRH VKKGRNGQKD LSEWVLCRVH HANADSQGIY SVQAGNDDEV ELSLLDEVFL 180 SMEDNDDATS FPKLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	4e-50	NAC family protein