PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027181012.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ARR-B
Protein Properties Length: 559aa    MW: 62089.1 Da    PI: 5.9534
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027181012.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like833.2e-26315369256
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ.kYRla 56 
                      +++WtpeLH++Fv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQ kYR++
  XP_027181012.1 315 SKVDWTPELHKKFVQAVEQL-GIDQAIPSRILELMKVEGLTRHNVASHLQqKYRMH 369
                     6899****************.****************************549**86 PP
2Myb_DNA-binding39.61.3e-12317364246
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqk 46 
                        WT+e+++++v+av+qlG +   +++I + m  +g+t+ ++ s++q+
   XP_027181012.1 317 VDWTPELHKKFVQAVEQLGIDqaIPSRILELMKvEGLTRHNVASHLQQ 364
                      57********************************************96 PP
3Response_reg34.51.1e-12241292109
                     EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
    Response_reg   2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                     l+++ +   +  +r  le+ +y +v  + +  eal  + +k   +++ ++ ++  +++G+  +k +++++ +lp i++++++  +++ +++ +Ga
  XP_027181012.1  24 LLIESDACSAVEMRLKLEEMDY-IVSIFCNENEALSAISNKSecFHVAIVEVNTQNSSGI--FKFLETAN-DLPTIMISDNNCRSTMMKCIALGA 114
                     666666666667778889****.***************999999*************995..78888877.9*********************** PP

                     SEEEESS--HHHHHH CS
    Response_reg  95 kdflsKpfdpeelvk 109
                      +fl Kp++ ++l +
  XP_027181012.1 115 VEFLQKPVSDDKLQN 129
                     **********99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    
MPAMVCTADE LLGWKDFPKG LKVLLIESDA CSAVEMRLKL EEMDYIVSIF CNENEALSAI  60
SNKSECFHVA IVEVNTQNSS GIFKFLETAN DLPTIMISDN NCRSTMMKCI ALGAVEFLQK  120
PVSDDKLQNI WQHVVHKQAF NAGGKDVSEA LKPVKESLIS MLQLQFGNAE TGKQASVEAE  180
QENNQDLLSG CDKYPAPSTP QLKQGERSLD DGDCQDQANF SMEQDSAEQD GECKSVETTC  240
GNSIFECTAL GSPASGEDAV KEEHESTNCC RTEINTTTCY EGKDRPSNKT SNAAGLNRSS  300
AVRDTCGIKA SKKRSKVDWT PELHKKFVQA VEQLGIDQAI PSRILELMKV EGLTRHNVAS  360
HLQQKYRMHR RHILPKENER RWPHPGGSAQ RNYYPHKPVM AFPPYHPNHT IPGGQVYPAW  420
IPPGTYTGGI HIWGSPYYPG WQVPNESWYW KPYSVTHADA WGCPVMPQTV GSYPQFAQQT  480
APDFQTTKEM QYTGSTLLNP SDLHAAEEVI DQVVKEAISK PWLPLPLGLK PPSTECVLNE  540
LSKQGISKIP PHTNAPNIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-145ARR-B family protein