PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027181522.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NF-YB

Protein Properties

Length: 167aa MW: 18674.6 Da PI: 4.5163

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027181522.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	42.2	2e-13	30	122	7	94
NF-YB 7 flPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 +lP + v r++k l a++ i+ ++a + e fi ++t+ a+d c++ +r+ in++d+l al ++ f ++v+pl++ l+++r+ + XP_027181522.1 30 ELPKTIVRRLVKDKLSqlsAESEITvfREALQAFSESGRIFIHYLTATANDICKESNRQIINAEDVLKALEEIDFPEFVQPLRASLEEFRQRN 122 57888889999976541115555543379999999*******************************************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MAEKEKEKEK AKENGEVTTV TESAAGELEE LPKTIVRRLV KDKLSQLSAE SEITVFREAL 60 QAFSESGRIF IHYLTATAND ICKESNRQII NAEDVLKALE EIDFPEFVQP LRASLEEFRQ 120 RNAGKRSGSS KAKEADRKGK RKEPPTAEAE DEQDATKSDE SEDGADD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27470.1	3e-37	NF-YB family protein