PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027181555.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 297aa MW: 32209.7 Da PI: 8.0538

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027181555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.9	1.2e-39	43	104	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+a++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss XP_027181555.1 43 KEQAMNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSS 104 7899******************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MDTAQWPQEI VVKPMEEIVV PNGSTTSCSK PGSSLERKVR PQKEQAMNCP RCNSTNTKFC 60 YYNNYSLSQP RYFCKTCRRY WTEGGSLRNI PVGGGSRKNK RSSSSSSSSV SSSKKLPDLI 120 PPSSHQNPKI HEGQDLNLGF SSTHDFKTIT ELIQVPNFDN NNKENLTSSS SNSTTTSCHL 180 SALELLTGIT PIRGLSSFVP MPITTDPTVV YSSSGGFQLP EFKPSLSFSL DGLGSSGGYV 240 NLHGVQESSG GRPLFPFEDL KQVSGTTSTD VDQQNREQHA DSTGYWTGVL GGGGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64620.1	1e-48	Dof family protein