PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027181997.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 230aa    MW: 25379 Da    PI: 6.8889
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027181997.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-18138188255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+    +  r++lg+f+ta +Aaka++ a+ k++g
  XP_027181997.1 138 HYRGVRRRP-WGKYAAEIRDPVR---KgSRVWLGTFDTAMDAAKAYDSAAFKMRG 188
                     7********.**********643...24*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MSADESTTLE LIRQHLLGDF TSNDTESFLN NLSLCFADVC NDDDHNKTTI SSGKPDPTTS  60
ESDSSSFISD PSKQPDTPVS RHLKLEPDFF DFETEPTILK LEPVSGSPYS DNPFRPASAS  120
VKSDPFANGS GGVRDGRHYR GVRRRPWGKY AAEIRDPVRK GSRVWLGTFD TAMDAAKAYD  180
SAAFKMRGRK AILNFPLEAG KSSPPVNSRR KSRRESSVAV DHGHHQVSET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61590.11e-22ERF family protein