PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027182024.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 125aa    MW: 14410.7 Da    PI: 9.2109
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027182024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.63.7e-2226113189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     kfYn+YA+++ Fsv+k++ +k  ++g +t+r++ C k+g +++ + + +  +r r+  +tgC ak+++ + + + k++v++l+leHnHel
  XP_027182024.1  26 KFYNKYASKMDFSVCKNYLNKD-KDGVTTSRRYSCCKKGVKRKYEGD-VMPKRARTPMKTGCGAKMVIVLFRgTMKYRVHDLVLEHNHEL 113
                     6*****************9998.8999***************99999.999999999*************999****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MDCSKLAEDR TLELGIEFNG EEDAYKFYNK YASKMDFSVC KNYLNKDKDG VTTSRRYSCC  60
KKGVKRKYEG DVMPKRARTP MKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIETGSR  120
PCVVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.17e-12FAR1 family protein