PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027182100.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bHLH

Protein Properties

Length: 534aa MW: 60051.7 Da PI: 7.6328

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027182100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.7	1e-13	341	384	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + Er+RR+riN+++ +Lr+l+P+ + K++Ka++L A +YI++Lq XP_027182100.1 341 ITERNRRHRINHGLLTLRSLVPNiS------KMDKASTLADAYDYIQELQ 384 68*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MLQQQKGTKS SSCSSKTIRG TSQQGQAPDR YKEVFERFKD MAALDQALER LRVLVKNNVW 60 DYCIVWKLGD DPSSFIEWRG CCCSGGNWLE NVKEESGKDQ YLFAQCRDGD FKHPIRTKAC 120 EKLAKFPLSI PLYSGRIHGE VVMSNQARWH VNSNNTSSDE AIGTQVLVPV AGGLIELFST 180 NLVQENQQII DFILAQYVPV ELETMASHRR TQLNAAEPPH KPFLDDCFNN LPASVCHMIP 240 VPNLQYPTFI PNSSNHPSFE GSSISSDLPK DYQLLNVCSG SASCSTSPEK SSGRHPGNLD 300 SRRMKDPSCG FGSAKWAAET NENLRGRNKT ERDNYHSKNL ITERNRRHRI NHGLLTLRSL 360 VPNISKMDKA STLADAYDYI QELQKSVEEY QGKLRDLAEQ EANMYSSEQE VPKPCREIQR 420 TDYQPTIEQG DSRRHSSTND KKQGKVKIEV SQIGTRDFLV KIICTQKRGG FLRLMQAMDS 480 FGLQVTDANV TTSNGLVLNV LKAEAFSEEI QPTTLKNSLM ELFLQDGQGK IQLA

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MLQQQKGTKS SSCSSKTIRG TSQQGQAPDR YKEVFERFKD MAALDQALER LRVLVKNNVW  60
DYCIVWKLGD DPSSFIEWRG CCCSGGNWLE NVKEESGKDQ YLFAQCRDGD FKHPIRTKAC  120
EKLAKFPLSI PLYSGRIHGE VVMSNQARWH VNSNNTSSDE AIGTQVLVPV AGGLIELFST  180
NLVQENQQII DFILAQYVPV ELETMASHRR TQLNAAEPPH KPFLDDCFNN LPASVCHMIP  240
VPNLQYPTFI PNSSNHPSFE GSSISSDLPK DYQLLNVCSG SASCSTSPEK SSGRHPGNLD  300
SRRMKDPSCG FGSAKWAAET NENLRGRNKT ERDNYHSKNL ITERNRRHRI NHGLLTLRSL  360
VPNISKMDKA STLADAYDYI QELQKSVEEY QGKLRDLAEQ EANMYSSEQE VPKPCREIQR  420
TDYQPTIEQG DSRRHSSTND KKQGKVKIEV SQIGTRDFLV KIICTQKRGG FLRLMQAMDS  480
FGLQVTDANV TTSNGLVLNV LKAEAFSEEI QPTTLKNSLM ELFLQDGQGK IQLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	3e-66	bHLH family protein