PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027182274.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 419aa    MW: 48081.2 Da    PI: 10.1845
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027182274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.34.3e-161694999
                    HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  9 dvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      +k+g l +p +f  ++  g + ++    +l  +  r+W+vk+  +++s    l++GW++F+ +n+L++gDfvvFk++g++ f   v+vf+ 
  XP_027182274.1 16 PGFKNG-LKIPVSFS-KYlcG-E-RS--NYMLLRRGAREWRVKM--SGQS----LEEGWRKFAVENNLEVGDFVVFKHEGNMVF--DVRVFDP 94
                    566666.*******8.77554.2.23..699999999*******..8887....************************999999..8888875 PP
2B357.23e-18183263487
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       ++++  k+++l +p  fa+++++ + +s +++l+d++ +sW+v++    k +++ +++GW+ F kangLk gD++ ++l+++
  XP_027182274.1 183 SSIKPYCIKNSILHIPLGFARANNLRN-RSCEVILRDPQQKSWQVEM--VPKASHVCFRRGWSAFFKANGLKLGDTFKIELVEN 263
                     56789999***************8885.677****************..99999*************************99874 PP
3B363.82.8e-20326413596
                     -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     ++++++ k ++l lp kfa++ g++k ++ +++l+de+ r+W+v+l  ++k++++++++GW++F  +ngLkegD+  F+l++ ++++++v +
  XP_027182274.1 326 TIKAYSIKYSILHLPMKFARSTGLIKLNG-EMILRDERKRQWSVRL--QQKGKHVLISSGWSKFRTSNGLKEGDTYKFELIK-KGQRPLVNF 413
                     56899999***************998665.****************..9*******************************99.677788765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MRVSPEKPHF FKPILPGFKN GLKIPVSFSK YLCGERSNYM LLRRGAREWR VKMSGQSLEE  60
GWRKFAVENN LEVGDFVVFK HEGNMVFDVR VFDPSHCERE YPWIHDVTSD EPKEEDIPSS  120
KKFKSAGEAI GLRRNKARTR LTAKSGISID SEGNSEENEE STPTSRKASS DDDEEPNKPY  180
FVSSIKPYCI KNSILHIPLG FARANNLRNR SCEVILRDPQ QKSWQVEMVP KASHVCFRRG  240
WSAFFKANGL KLGDTFKIEL VENGKIPVLD FVPCLTSSNK EPHLKRPTPP QPRPFSTVKP  300
KGKCLDKKLE ASPESNNDHP NSFVSTIKAY SIKYSILHLP MKFARSTGLI KLNGEMILRD  360
ERKRQWSVRL QQKGKHVLIS SGWSKFRTSN GLKEGDTYKF ELIKKGQRPL VNFYCKYCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.11e-51B3 family protein