PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027182458.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family LBD
Protein Properties Length: 132aa    MW: 14584.4 Da    PI: 7.1259
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027182458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26061.52.3e-19126844100
          DUF260  44 kllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                     ++ ++lpe++r da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++lal+++e
  XP_027182458.1  12 RFFNELPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAE 68 
                     7899************************************************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MGACKLKLFS QRFFNELPEH QRGDAVSSMV YEANARVRDP VYGCVGAISS LQQQIDVLQT  60
QLALAQAEVV QMRMRQFSSI SPGTATNSPD HNNITSPSSS RHTQSHHDRT SLFAMGMVID  120
HQASMGESLW SC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.11e-33LBD family protein