PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027182561.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CPP

Protein Properties

Length: 561aa MW: 61582.1 Da PI: 8.4515

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027182561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.8	5.1e-14	133	173	1	42
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 k+kk+CnCk+s+Clk+YCeCfa+g++C+ C+C++C+N++e+ XP_027182561.1 133 KKKKQCNCKNSRCLKLYCECFASGTYCNG-CNCTKCHNTSEH 173 589************************.******9986 PP
2	TCR	52.1	1.3e-16	218	257	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgCnCkks ClkkYCeCf+a++ Cse+CkC dCkN e XP_027182561.1 218 KHNKGCNCKKSGCLKKYCECFQANVLCSENCKCIDCKNFE 257 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MEPMEASSPT APKNGFPAKR LARQLDFTAT PAMCRPLAAN VILPEHPQAQ LQSKLLALAK 60 PAPPAILVSQ PQEVSGEKSP PSRAMQQRLK PTVPVVMRLA HTVRRPTSQE VNKYGSPKLP 120 DQRSIELRDA TPKKKKQCNC KNSRCLKLYC ECFASGTYCN GCNCTKCHNT SEHEAQRKEA 180 IEIILERNPD AFQPKIAKSP VGTTDGSVEA YDVTIMGKHN KGCNCKKSGC LKKYCECFQA 240 NVLCSENCKC IDCKNFEGSK ERDYMFHEGP TNDFRFVNQA INAAICGTSK FSYFNTLPAT 300 KKRKTEQLIC RATSVDAVKD RLEQIRQEND LAPTTASFSP LSAPSAQPTT AMTSGISQFT 360 HRPLLAEILQ FEHLKELCSL LVVVSAEAAK KISGKKHVIN KGDIEEVETS ISSAIQGSKD 420 VHAQYRNESF NTSQVEGNLA YGCQSGEGDR ETGSAASPET LPLMSNDRDV ATEGADSPTG 480 ASNPKRSTTI KSPDRDVFKE IDAEQERLVL TNFCGFLNKL ITCTIIRETS YLSLSRNGLE 540 SQLGVVQNCN SKPTIQTRKS V

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MEPMEASSPT APKNGFPAKR LARQLDFTAT PAMCRPLAAN VILPEHPQAQ LQSKLLALAK  60
PAPPAILVSQ PQEVSGEKSP PSRAMQQRLK PTVPVVMRLA HTVRRPTSQE VNKYGSPKLP  120
DQRSIELRDA TPKKKKQCNC KNSRCLKLYC ECFASGTYCN GCNCTKCHNT SEHEAQRKEA  180
IEIILERNPD AFQPKIAKSP VGTTDGSVEA YDVTIMGKHN KGCNCKKSGC LKKYCECFQA  240
NVLCSENCKC IDCKNFEGSK ERDYMFHEGP TNDFRFVNQA INAAICGTSK FSYFNTLPAT  300
KKRKTEQLIC RATSVDAVKD RLEQIRQEND LAPTTASFSP LSAPSAQPTT AMTSGISQFT  360
HRPLLAEILQ FEHLKELCSL LVVVSAEAAK KISGKKHVIN KGDIEEVETS ISSAIQGSKD  420
VHAQYRNESF NTSQVEGNLA YGCQSGEGDR ETGSAASPET LPLMSNDRDV ATEGADSPTG  480
ASNPKRSTTI KSPDRDVFKE IDAEQERLVL TNFCGFLNKL ITCTIIRETS YLSLSRNGLE  540
SQLGVVQNCN SKPTIQTRKS V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-115	CPP family protein