PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027182589.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 300aa MW: 33797.1 Da PI: 6.7066

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027182589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.6	9.1e-08	249	282	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + XP_027182589.1 249 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 282 469*****************************87 PP
2	ELK	22.6	2.5e-08	203	224	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ XP_027182589.1 203 ELKLELKQGFRSRIEDVREEIL 224 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MQEQGLGMMA GSGSGGLGGL GDVSVAIPAG DYQNRQLKAE IATHPLYEQL LSAHVACLRV 60 ATPIDHLPLI DAQLSQSHHI LRSYASQQHL SHSLSPHERQ DLDNFLGQYL LVLCSFKEQL 120 QQHVRVHAVE AVMACREIEQ NLQALTGISI GEGSGATMSD DEDELQMDFS LDQSGADGHD 180 MMGFGPLLPT ESERSLMERV RQELKLELKQ GFRSRIEDVR EEILRKRRAG KLPGDTTSVL 240 KNWWQQHSKW PYPTEDDKAK LVEETGLQLK QINNWFINQR KRNWHSSSQS VTSLKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	300	RKRNWHSSSQSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-161	TALE family protein