PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027182667.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 281aa MW: 31024.1 Da PI: 9.5989

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027182667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105	4.4e-33	42	96	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av++LGG++kAtPk++l++m++kgLtl+h+kSHLQkYRl XP_027182667.1 42 KPRLRWTADLHERFVDAVTKLGGPDKATPKSVLRVMGLKGLTLYHLKSHLQKYRL 96 79****************************************************8 PP
2	Myb_DNA-binding	68	1.6e-21	44	95	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ XP_027182667.1 44 RLRWTADLHERFVDAVTKLGGPdkaTPKSVLRVMGlKGLTLYHLKSHLQKYR 95 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MERMYGGVGG GGVGGNCYPF ERNGGGGGGG GLGGVVMTRD PKPRLRWTAD LHERFVDAVT 60 KLGGPDKATP KSVLRVMGLK GLTLYHLKSH LQKYRLGQQA KKQIPAEQSK ENSGDTFGQY 120 SSHASGSISS RVNTEKREIQ ISEALKCQIE VQKRLQDQLE VQKKLQMRIE AQGKYLQAIL 180 DKAQKSLSLD VNNPGNLEAT KAQLSEFNLA LSSFIENVNA EERNAEIMDK RMLNDMNRKM 240 SEQNYLGLNH GETNDVKLRL EGASINFDLN TRSSYDFIGT S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	4e-82	G2-like family protein