PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027182856.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 231aa MW: 26526.3 Da PI: 9.9749

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027182856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.3	4.3e-16	133	222	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v+ +l lp +f++++ +k ++ t+tl de+ +++ k+ k++ l++GW++F +++L +gD +vF+l++ ++f +v XP_027182856.1 133 FVKPMLQSHVTGGFWLGLPVQFCKTYL-PK-RDETVTLVDEQEEEYPTKYLAVKTG----LSGGWRGFSIEHELVDGDALVFQLIEPTKF--KVY 219 89*******************9995.33.5669***********656665....**********************987777..787 PP EE- CS B3 96 vfr 98 ++r XP_027182856.1 220 IVR 222 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MVVSKKGALA YEERRHERLE QNKKKLEQLN LTKLSQALHS TISPKPSPMK KVKPKVARQP 60 VDPSTIRRSS RVADKPPPNY KEVPIEPLGR PRRYRYSRRD LSNRVYASDE DREYAQERAE 120 VLQSGLDSKI PSFVKPMLQS HVTGGFWLGL PVQFCKTYLP KRDETVTLVD EQEEEYPTKY 180 LAVKTGLSGG WRGFSIEHEL VDGDALVFQL IEPTKFKVYI VRVNQAEDSS N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-77	B3 family protein