PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027183044.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 223aa    MW: 25017.7 Da    PI: 6.0386
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027183044.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-184696256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     y+GVr+++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+ +++g+
  XP_027183044.1 46 TYHGVRRRS-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAAIAIKGH 96
                    69****887.**********843...6**********************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MKGNEQQTSS TSYDPSIKPD AAKEDTRSKR AKKNDHLDAR KGENPTYHGV RRRSWGKWVS  60
EIREPRKKSR IWLGTFATPE MAARAHDVAA IAIKGHSAFL NFPDLAHQLP RPASKLPKDI  120
QAAAAKAAAL AAPTSHDDRE LSPDKLEEPY SPEGTVTSDS SASPVLSHNG RDDDPFLDLP  180
DLFFDLSDHQ FDEFCYKSPW QLAGYESTQG ELWTEDLFLW DHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-32ERF family protein