PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027183124.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HD-ZIP
Protein Properties Length: 236aa    MW: 26774.7 Da    PI: 4.7598
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027183124.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.81.1e-1948100456
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++f+++q++ Le++Fe ++ p  + +++LA+klgL+ rqV +WFqN+Ra+ k
  XP_027183124.1  48 KRRFNDDQIRYLESMFEAESRPELRVKQQLANKLGLQPRQVAIWFQNKRARSK 100
                     568************************************************99 PP
2HD-ZIP_I/II111.17.2e-3648138393
     HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     krr++++q++ LE++Fe+e++ e + K++la++Lglqprqva+WFqn+RAR k+kq+E+dy++Lk++yd l+++ e+L+ke e+L+ e+++
  XP_027183124.1  48 KRRFNDDQIRYLESMFEAESRPELRVKQQLANKLGLQPRQVAIWFQNKRARSKSKQIEQDYSVLKASYDDLASKFESLKKESESLHVEVQK 138
                     9*************************************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MFQRGTAPPA CPIPSSSWTA QHVPADEVVE LELHSMSGSS TTSKTISKRR FNDDQIRYLE  60
SMFEAESRPE LRVKQQLANK LGLQPRQVAI WFQNKRARSK SKQIEQDYSV LKASYDDLAS  120
KFESLKKESE SLHVEVQKLR QLTIRSGKEE YGREDIELEA DQTTEFLLKA SSSHEQRSAI  180
CDENFTRSTD YLVEATNSLY MAQLADGSLT STEDGCSFEA NDLIDNSSCN SQLWEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.12e-27HD-ZIP family protein