PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027183472.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 187aa    MW: 20099.2 Da    PI: 4.4248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027183472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.13.4e-162168355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+G+r  +++g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+ +l+g
  XP_027183472.1 21 YRGIR--SRSGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAAIALKG 68
                    99**6..678*********843...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MSSTSSSGSP SRPSGGKHPM YRGIRSRSGK WVSEIREPRK TTRIWLGTYP TPEMAAAAYD  60
VAAIALKGSD IVLNFPDRVS SYPAPASPSP SDIRSAAAGA AEMMKEKTAG RGDDGDDDGN  120
DHQELAFDQD RGLAGEDEFI DVEALIDMPN LLVDMAEGML VSPPRIHSPP SSDSPEHSDV  180
DSLWSYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-31ERF family protein