PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027183577.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NF-YB
Protein Properties Length: 158aa    MW: 17000 Da    PI: 4.8334
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027183577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB184.58e-5826122197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdrflPian++rimkk+lPan+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy+eplk+yl++yreleg
  XP_027183577.1  26 VREQDRFLPIANIGRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKAYLARYRELEG 120
                     69********************************************************************************************9 PP

           NF-YB  96 ek 97 
                     ++
  XP_027183577.1 121 DT 122
                     96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MAEAPPVSPG GGGVESGGEQ SPQSNVREQD RFLPIANIGR IMKKALPANG KIAKDAKDTV  60
QECVSEFISF ITSEASDKCQ KEKRKTINGD DLLWAMATLG FEDYIEPLKA YLARYRELEG  120
DTRVPARGGD GVSNTVGTQM GSNAELSYTH VGYANSQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.17e-69NF-YB family protein