PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027183923.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 172aa    MW: 19654.1 Da    PI: 8.5498
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027183923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.51.5e-115311854128
             NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + k+w+f++ + +        n    +gyW  t + k+++  +g++ g kk L++ +g+++ g++t+W++h++rl
  XP_027183923.1  53 TGKKWFFYTVEPND-------NVFSGDGYWTPTSE-KAIYI-GGQVNGYKKELIYCRGTEHPGKRTNWCIHQFRL 118
                     45678888776553.......456789*****976.99999.99*****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MEKPSAASAR GNDDSGGKRT RIEVPVGCKF DPSDEELMFY LMNKILDSCE YSTGKKWFFY  60
TVEPNDNVFS GDGYWTPTSE KAIYIGGQVN GYKKELIYCR GTEHPGKRTN WCIHQFRLNP  120
DVYVANAIGN NIEYKKIYKK TGISTIYASR LYKPNLRGDF RGFDDYGFGF HG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.18e-13NAC family protein