PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027184294.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 284aa    MW: 31531.6 Da    PI: 8.9395
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027184294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.53.9e-2161422128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv..ePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgy 82 
                     p GfrF+Pt+ee++   L  k+++++ ++++v++e  +y +   Pw+L +              k++++  y F+k +k +a  +r+ r++  g+
  XP_027184294.1   6 PIGFRFRPTEEEII-TLLWLKASNQQKHTTDVVPEKILYGAdaSPWKLFRdddvrwqlcddsGKKHTKRMAYVFTKLSKMSA--NRTARTAGCGT 97 
                     89************.67777777777777799999877765338****6457888988776422223346699999999876..5********** PP

             NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     W+ + k +++ +++ge +g +k+L +   ++ +++   W+mhey+l
  XP_027184294.1  98 WEGQAKAQDIPNSRGEIIGSRKMLSYVL-NSGSPQGGGWIMHEYSL 142
                     **************************94.45555789*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MDRDCPIGFR FRPTEEEIIT LLWLKASNQQ KHTTDVVPEK ILYGADASPW KLFRDDDVRW  60
QLCDDSGKKH TKRMAYVFTK LSKMSANRTA RTAGCGTWEG QAKAQDIPNS RGEIIGSRKM  120
LSYVLNSGSP QGGGWIMHEY SLAGSLLDRI GPTDYVVCRI TIDDEKYTEV KKVTEAKQGV  180
NQSGSMRCTK NPKVLGKRSE PSFVQQRSNP SKMPRSGVVE EETSGNAAAN LAMGASTDGT  240
IETPNSLNNH ERFVINPQAI MSHKLFGMDG QTSDRDASLR VLNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.12e-15NAC family protein