PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027185863.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 304aa MW: 34059.8 Da PI: 6.3927

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027185863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.1	3.1e-31	69	122	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rF++ave+LGG+e+AtPk++l+lm+ kgL ++hvkSHLQ+YR+ XP_027185863.1 69 PRLRWTPDLHLRFLHAVERLGGQERATPKSVLQLMNTKGLNITHVKSHLQMYRS 122 8****************************************************7 PP
2	Myb_DNA-binding	51.2	2.8e-16	70	121	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++++av++lGg t+k++ + m+ kg+ ++ks++q+y+ XP_027185863.1 70 RLRWTPDLHLRFLHAVERLGGQeraTPKSVLQLMNtKGLNITHVKSHLQMYR 121 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MEGSGDAECS KTCPSSGETE ADEDENEDEG KIDDDHKQKD GGTSSNSSTV EENEINKPPV 60 RPYVRSKMPR LRWTPDLHLR FLHAVERLGG QERATPKSVL QLMNTKGLNI THVKSHLQMY 120 RSKKIDDPSQ GITDHRQVFE GVDPNIFNLS QIPMFPGFHH NHKSTFRILN SNQLSSWHTD 180 ELQSTMQSFH DQQEYQQDRL KSSKQVQSKT VYFSSGRSKI LGVEEGMILE KRAGVKRKAS 240 NCNVHLNLSL GLGPVRDGYH EGLEDDDGHL SLSLCSPSSS KIRRLIDDTS TENACGASTL 300 DLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-53	G2-like family protein