PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329332.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 1087aa MW: 121135 Da PI: 6.3745

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.7	9e-23	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ ++W +++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++ XP_027329332.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldySMQPPA-QELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDEK 217 99***************************9545444.38********************************************..5688 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 ++l+++++r+ XP_027329332.1 218 QQLLLGIRRA 227 889**997 PP
2	Auxin_resp	125.2	4.4e-41	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFv++++k++ka++++vs+GmRf+m+fete+s rr++Gt++g+sdldpvrW+nS+Wr+L+ XP_027329332.1 252 AAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQ 334 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1087 aa Download sequence
MKAPSNGYLP NSGEGERKTI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE 60 TDFIPSYPNL PSKLICMLHN VALHADPETD EVYAQMTLQP VNKYEKEAIL ASDMGLKQSR 120 QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDYSMQ PPAQELVAKD LHDNTWAFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKQQL LLGIRRANRQ QPALSSSVIS 240 SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLA KYNKAMYTQV SLGMRFRMMF 300 ETEESGVRRY MGTITGISDL DPVRWKNSQW RNLQVGWDES TAGERPSRVS IWEIEPVVTP 360 FYICPPPFFR PKFPRQPGMP DDESDIENAF KRAMPWLGDD FGMKDASSSL FPGLSLVQWM 420 SMQQNNQLSA APSGCFPSML PSNTLHANLT PDDPSKLLSF QTPVLSAPNL QFNKPNLPNQ 480 INQLQQSPVS WPQQQQQLQQ QQQQQQLQQQ QQQQQQQQQQ LQQQQQQVQH ATIMNNGVVA 540 SNQISNQFVQ PQGAYTQLQQ QQSLPGGIPP QQSIQSANKN TFPLTSLPQD SQFQQQIDQQ 600 ASLLQRQQQQ THLQQSPLQL LQQNLPQRAP QLPPVTQMLQ QNPSEQHHLQ LLQTLQQQQQ 660 QQHLSTSSPL LQSQLLQQQN THQQSQQLPP LPVSQHIPQQ FGNHPLSAEK LLNSNFSSST 720 LMQSQHLPVN QPQNTQKSLT ITRAPSTLTD GDAPSCSTSP STNNCQISPP NLLKRNQQLP 780 ATLGGSLVVE PTSNLIQELQ SKPDVQIKHE LPNIKGPDQL KYKGAITDQL EASSSGTSYC 840 LDPGNVQQNL PLSNFCMEGD VQSHPRNSLP FDSNLDGLTP DTMLLRGYDS PKDLQNLLSN 900 YGGAPRDIET ELSTADISSQ SFGVPNMPFK PGCSSDAGIN DTGVLNNSSL RANQTQRMRT 960 YTKVQKRGSV GRCIDVTRYK GYDELRHDLA RMFGIEGQLE DPQRTDWKLV YVDHENDILL 1020 VGDDPWDEFV TCVQSIKILS SAEVQQMSLD GDLGGGTVPI PNQACSGDSG NAWRGQYDDN 1080 SAASFNR

Sequence ? help Back to Top

Protein Sequence Length: 1087 aa Download sequence

MKAPSNGYLP NSGEGERKTI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE  60
TDFIPSYPNL PSKLICMLHN VALHADPETD EVYAQMTLQP VNKYEKEAIL ASDMGLKQSR  120
QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDYSMQ PPAQELVAKD LHDNTWAFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKQQL LLGIRRANRQ QPALSSSVIS  240
SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLA KYNKAMYTQV SLGMRFRMMF  300
ETEESGVRRY MGTITGISDL DPVRWKNSQW RNLQVGWDES TAGERPSRVS IWEIEPVVTP  360
FYICPPPFFR PKFPRQPGMP DDESDIENAF KRAMPWLGDD FGMKDASSSL FPGLSLVQWM  420
SMQQNNQLSA APSGCFPSML PSNTLHANLT PDDPSKLLSF QTPVLSAPNL QFNKPNLPNQ  480
INQLQQSPVS WPQQQQQLQQ QQQQQQLQQQ QQQQQQQQQQ LQQQQQQVQH ATIMNNGVVA  540
SNQISNQFVQ PQGAYTQLQQ QQSLPGGIPP QQSIQSANKN TFPLTSLPQD SQFQQQIDQQ  600
ASLLQRQQQQ THLQQSPLQL LQQNLPQRAP QLPPVTQMLQ QNPSEQHHLQ LLQTLQQQQQ  660
QQHLSTSSPL LQSQLLQQQN THQQSQQLPP LPVSQHIPQQ FGNHPLSAEK LLNSNFSSST  720
LMQSQHLPVN QPQNTQKSLT ITRAPSTLTD GDAPSCSTSP STNNCQISPP NLLKRNQQLP  780
ATLGGSLVVE PTSNLIQELQ SKPDVQIKHE LPNIKGPDQL KYKGAITDQL EASSSGTSYC  840
LDPGNVQQNL PLSNFCMEGD VQSHPRNSLP FDSNLDGLTP DTMLLRGYDS PKDLQNLLSN  900
YGGAPRDIET ELSTADISSQ SFGVPNMPFK PGCSSDAGIN DTGVLNNSSL RANQTQRMRT  960
YTKVQKRGSV GRCIDVTRYK GYDELRHDLA RMFGIEGQLE DPQRTDWKLV YVDHENDILL  1020
VGDDPWDEFV TCVQSIKILS SAEVQQMSLD GDLGGGTVPI PNQACSGDSG NAWRGQYDDN  1080
SAASFNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein