PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329543.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TALE

Protein Properties

Length: 414aa MW: 46613.9 Da PI: 6.2307

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.5	9.6e-08	363	396	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_027329543.1 363 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 396 469*****************************87 PP
2	ELK	28.8	2.7e-10	317	338	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_027329543.1 317 ELKHELKQGYKEKIVDIREEIL 338 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MAYHNQHLSQ QDNPLHYFPH HSLRSVLPDQ QQLPSSPDPT SKPPSDPHPL QTAPNWLNDA 60 LLRPHYTDNT TNNNDNDNNN NVNNNGSNFL NLHSTSSAQW LARPILPRNR SEVIDDVAAT 120 AGDSLIAGGE SSDLKEGKGE GDGVNLQIGR WKAEILAHPM YEQLLSAHVA CLRIATPVDQ 180 LPRIDAQLAQ SQNVVAKYSA FGHAAQNMLG DDKDLDHFMS HYVLLLCSFK EQLQQHVRVH 240 AMEAVMACWE IEQSLQSLTG VSPGEGTGAT MSEDEDDQVD SDANLFDNSL DGPDSMGFGP 300 LVPTENERSL MERVRLELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT TSVLKAWWQS 360 HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NPSTSTVLKS KRKR

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MAYHNQHLSQ QDNPLHYFPH HSLRSVLPDQ QQLPSSPDPT SKPPSDPHPL QTAPNWLNDA  60
LLRPHYTDNT TNNNDNDNNN NVNNNGSNFL NLHSTSSAQW LARPILPRNR SEVIDDVAAT  120
AGDSLIAGGE SSDLKEGKGE GDGVNLQIGR WKAEILAHPM YEQLLSAHVA CLRIATPVDQ  180
LPRIDAQLAQ SQNVVAKYSA FGHAAQNMLG DDKDLDHFMS HYVLLLCSFK EQLQQHVRVH  240
AMEAVMACWE IEQSLQSLTG VSPGEGTGAT MSEDEDDQVD SDANLFDNSL DGPDSMGFGP  300
LVPTENERSL MERVRLELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT TSVLKAWWQS  360
HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NPSTSTVLKS KRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	394	414	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	0.0	TALE family protein