PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027329822.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 244aa    MW: 28130.7 Da    PI: 9.9634
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027329822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.13.6e-312574150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyey+
  XP_027329822.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYA 74
                    79***********************************************8 PP
2K-box107.91.2e-35931894100
           K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     s+ +s++ea+++ +qqe++kLk++i+ +q+ +Rh+lGe L+sLslkeL++Le++Lek+l+++Rs+K+e l++ ie +qk+e elq++n+ Lr+k+
  XP_027329822.1  93 SNAESVSEANTQFYQQESSKLKRQIRDIQNLNRHILGEALSSLSLKELKNLESRLEKGLSRVRSRKHETLFADIEFMQKREIELQNHNNFLRAKI 187
                     444559****************************************************************************************9 PP

           K-box  99 ee 100
                     +e
  XP_027329822.1 188 AE 189
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MEFPNQAISE GSSQKKTGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA  60
LVVFSSRGRL YEYANNSVRG TIERYKKACA ASSNAESVSE ANTQFYQQES SKLKRQIRDI  120
QNLNRHILGE ALSSLSLKEL KNLESRLEKG LSRVRSRKHE TLFADIEFMQ KREIELQNHN  180
NFLRAKIAEH ERAQQQPQQQ PNLMPGNVCE SIPSQSYDRN FFPVNLIDSN HHYSRQDQTA  240
LQLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58780.18e-94MIKC_MADS family protein