PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027330949.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 222aa MW: 25186.7 Da PI: 6.1574

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027330949.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.2	8.9e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr gi+KKAeELSvLCdaev +iifs tgkl+ey+s XP_027330949.1 9 KKIDNLTARQVTFSKRRRGIFKKAEELSVLCDAEVGLIIFSATGKLFEYAS 59 68***********************************************86 PP
2	K-box	50.3	1e-17	77	167	9	98
K-box 9 leeakaeslq.qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +e+ +++lq +++ L ke+ +++R++ Ged e L+l +L+qLe+ Le++l+++ ++K+ ++ +i lq+k +l+een++L++k XP_027330949.1 77 NESDRSQKLQlEHYVELSKEVADKTQQLRQMSGEDFEGLNLDDLKQLEKTLETGLEHVVETKETRIMGEIIALQQKGIKLEEENRKLKQKT 167 4555566666245789999999999999*************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MARQKIKIKK IDNLTARQVT FSKRRRGIFK KAEELSVLCD AEVGLIIFSA TGKLFEYASS 60 SMKDIITRYN QHLHDTNESD RSQKLQLEHY VELSKEVADK TQQLRQMSGE DFEGLNLDDL 120 KQLEKTLETG LEHVVETKET RIMGEIIALQ QKGIKLEEEN RKLKQKTAML WKGKSSLLVD 180 SDITMQEVVS SDSINVCSCN SGPSLEDDSS DTFLKLGLPF PS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24540.1	4e-75	MIKC_MADS family protein