PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331245.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 280aa MW: 31775.9 Da PI: 4.3775

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.1	8.6e-20	45	98	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++++q++ Le+ Fe+++++ e++++LAk lgL+ rqV +WFqNrRa++k XP_027331245.1 45 KKRRLSADQVQFLEKSFEEENKLEPERKTKLAKDLGLQPRQVAIWFQNRRARWK 98 56689************************************************9 PP
2	HD-ZIP_I/II	129.8	1.1e-41	44	136	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls++qv++LE+sFeee+kLeperK++la++Lglqprqva+WFqnrRAR+ktkqlEkdye+L++++++lk++ ++L ke+++L++e+++ XP_027331245.1 44 EKKRRLSADQVQFLEKSFEEENKLEPERKTKLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYESLHASFETLKASYDNLLKEKDKLKAEVTS 136 69**************************************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MGSRSMVSFE DVKGGKGCNR SFFGAFDVDE NGDDGMDEYF HQPEKKRRLS ADQVQFLEKS 60 FEEENKLEPE RKTKLAKDLG LQPRQVAIWF QNRRARWKTK QLEKDYESLH ASFETLKASY 120 DNLLKEKDKL KAEVTSLTEK VLARETREGG FKQGESETKG LQEQPEKPLL DSVSEGEGSK 180 VSVGGCKQED ISSARSDILD SDSPHYTDGV HSALLEAGDS SYVFEPDQSD LSQDEEDNFS 240 QSLLPPYIFP KLEDVDYTDP PESCNFGLTE EDHAIWTWAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	45	74	KKRRLSADQVQFLEKSFEEENKLEPERKTK
2	93	101	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	5e-47	HD-ZIP family protein