PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331266.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 246aa MW: 28362.4 Da PI: 9.6178

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331266.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	84.8	5e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev v+ifsstgkly+++s XP_027331266.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMIFSSTGKLYDFAS 59 8***********************************************86 PP
2	K-box	86.4	5.8e-29	81	170	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ + +q+e+a L+++++nLq+++R+++Ge+L+ L++keL++Le+qLe sl +R kK++ll+++i+el +k + +++en++L kk+ XP_027331266.1 81 SSASEIKFWQREAAMLRQQLHNLQESHRKMMGEELSGLTVKELRNLENQLEISLHGVRMKKDQLLMDEIQELNRKGNLIHQENMELYKKV 170 688999*********************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVMIFSS TGKLYDFAST 60 SMKSVIDRYN KSKEEHHQLG SSASEIKFWQ REAAMLRQQL HNLQESHRKM MGEELSGLTV 120 KELRNLENQL EISLHGVRMK KDQLLMDEIQ ELNRKGNLIH QENMELYKKV NLICQENMEL 180 KKKVYGTKDE NETKRNSVLT NGLVIGEDLQ VPVNLQLSQP ENQNYKAPSG TTKLGYDYDH 240 FADRPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	1e-108	MIKC_MADS family protein