PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331356.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CAMTA

Protein Properties

Length: 985aa MW: 110621 Da PI: 7.9881

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	139.4	1.1e-43	33	117	33	117
CG-1 33 rpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 +gsl+L+nrk +ryfrkDG+ w+kkkdgktvrE+hekLK g+ +vl+cyYah+e+n++fqrr+yw+L+e+le+ivlvhy+e XP_027331356.1 33 AEICGSLFLFNRKALRYFRKDGHRWRKKKDGKTVREAHEKLKAGSLDVLHCYYAHGEDNENFQRRSYWMLDEQLEHIVLVHYREI 117 3458******************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 985 aa Download sequence
MTNTRNSNYI RNAQLVGFEE ILREAEHRWL RPAEICGSLF LFNRKALRYF RKDGHRWRKK 60 KDGKTVREAH EKLKAGSLDV LHCYYAHGED NENFQRRSYW MLDEQLEHIV LVHYREIKEG 120 CRSCISHSPV VPVTLVGSSQ NSSVPSSTKI NSQISVVQTS FTSSANKVGQ NGQASEYEDV 180 NSETQASSHD QPISKSMLHN APQLAHEATG FSELLRSPLI SSLSSSFPSQ SPGTGLSTWT 240 LIPNYSRNTI NMHDGERHVE GSVEGSETDF NVQKLSNARL DVDCRIQDGV IFRDRLITNT 300 YIQPVKGASQ TVNQVQKEDG LDSFRTQCPD HADHPDATTT ILVEQKLQDD DTDNDESERV 360 ESGKLKKLDS FGRWMDKEIG GDCDNSLMAS DSGNYWSTLD AQNEDKEVSS LHHMQLDQGN 420 SLGPSLSQEQ LFSIHDFSPD WAYTGVKTKV LIAGTFLGSK KLSSETKWGC MFGEIEVSAE 480 VLAENVIRCQ TPLHSPGRVP FYVTCSNRLA CSEVREFEYL ETPTKFLRPV GIKISAEDEI 540 RLQMRLLKLV DLGADNKQWK CSVSECEKCK LKGTMYSMRD GSGVFEETFH IDGVDHIKPR 600 DVLFQRLMRD KLYEWLVFKV HEGAKGPRVL DDEGQGVIHL AAALGYVWAM GPLVAAGISP 660 NFRDARGRTG LHWASYFGRE ETVIALVKLG AAPGAVEDPT TAFPRGQKAA DLASNRGHKG 720 IAGYLAETDL TNQLSILTIK ENDTSNIATT IAADSAFESV DSDSSNMTMD EQHYLKESLA 780 VFRKSAQAAA SILAAFRARS FCQRQLAKRS SDISEAVLDL VADSLNKVQK MGHFEDYLHT 840 AALRIQKRYH GWKGRKDFLK IRDRIVKIQA HIRGHQVRKQ YKKVVWSVGI VEKAILRWRR 900 KGAGLRGFRI GQTVGNVAKD ADKNDEYEFL SIGRRQKSED VKKALDRVKS MVRNPVARDQ 960 YMRLIIKYQK LKIDDGGSSQ SQHVG

Sequence ? help Back to Top

Protein Sequence Length: 985 aa Download sequence

MTNTRNSNYI RNAQLVGFEE ILREAEHRWL RPAEICGSLF LFNRKALRYF RKDGHRWRKK  60
KDGKTVREAH EKLKAGSLDV LHCYYAHGED NENFQRRSYW MLDEQLEHIV LVHYREIKEG  120
CRSCISHSPV VPVTLVGSSQ NSSVPSSTKI NSQISVVQTS FTSSANKVGQ NGQASEYEDV  180
NSETQASSHD QPISKSMLHN APQLAHEATG FSELLRSPLI SSLSSSFPSQ SPGTGLSTWT  240
LIPNYSRNTI NMHDGERHVE GSVEGSETDF NVQKLSNARL DVDCRIQDGV IFRDRLITNT  300
YIQPVKGASQ TVNQVQKEDG LDSFRTQCPD HADHPDATTT ILVEQKLQDD DTDNDESERV  360
ESGKLKKLDS FGRWMDKEIG GDCDNSLMAS DSGNYWSTLD AQNEDKEVSS LHHMQLDQGN  420
SLGPSLSQEQ LFSIHDFSPD WAYTGVKTKV LIAGTFLGSK KLSSETKWGC MFGEIEVSAE  480
VLAENVIRCQ TPLHSPGRVP FYVTCSNRLA CSEVREFEYL ETPTKFLRPV GIKISAEDEI  540
RLQMRLLKLV DLGADNKQWK CSVSECEKCK LKGTMYSMRD GSGVFEETFH IDGVDHIKPR  600
DVLFQRLMRD KLYEWLVFKV HEGAKGPRVL DDEGQGVIHL AAALGYVWAM GPLVAAGISP  660
NFRDARGRTG LHWASYFGRE ETVIALVKLG AAPGAVEDPT TAFPRGQKAA DLASNRGHKG  720
IAGYLAETDL TNQLSILTIK ENDTSNIATT IAADSAFESV DSDSSNMTMD EQHYLKESLA  780
VFRKSAQAAA SILAAFRARS FCQRQLAKRS SDISEAVLDL VADSLNKVQK MGHFEDYLHT  840
AALRIQKRYH GWKGRKDFLK IRDRIVKIQA HIRGHQVRKQ YKKVVWSVGI VEKAILRWRR  900
KGAGLRGFRI GQTVGNVAKD ADKNDEYEFL SIGRRQKSED VKKALDRVKS MVRNPVARDQ  960
YMRLIIKYQK LKIDDGGSSQ SQHVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-154	CAMTA family protein