PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027331892.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 318aa    MW: 35702.9 Da    PI: 5.1238
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027331892.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.97.2e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+ Ed++l ++++ +G g+W+  +++ g++R++k+c++rw++yl
   XP_027331892.1 14 RGSWTAHEDKILTEYIRVHGEGRWRNLPKRAGLRRCGKSCRLRWLNYL 61
                     89********************************************97 PP
2Myb_DNA-binding51.52.3e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ + +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ 
   XP_027331892.1  67 RGNISSDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111
                      78999*****************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MGRSPCCSKE GLNRGSWTAH EDKILTEYIR VHGEGRWRNL PKRAGLRRCG KSCRLRWLNY  60
LRPDIKRGNI SSDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKKLKDAQ  120
LPLNGKSTEN PMSQITTTMP LPTTSSSPSL PPPSNVFRTK ATKCSKVLFL NPLPHSSMQL  180
ENNSKEEAEV EATSLLVDTL AANSSLSNQM GKEPGIYDNG FVSFPGEEKE LSTDLLIDFN  240
VDDISLSDLL NSDFSNMCNF GYSDVNNNDL EQLSPCSDQT PMFSDEVLKE WTQSNFSDET  300
NGSNNIHSFT SFLESSEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.12e-62MYB family protein