PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332451.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRF

Protein Properties

Length: 578aa MW: 62919.8 Da PI: 7.921

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332451.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.2	3.3e-24	215	259	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e XP_027332451.1 215 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHINRGRHRSRKPVEG 259 79****************************************985 PP
2	QLQ	63.6	5e-22	145	181	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy+ an+PvP++Ll +i+k XP_027332451.1 145 GPFTPSQWMELEHQALIYKYITANVPVPSHLLIPIRK 181 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MDLGVVGLDG LVGSDTCGFG SLASDPETKH NKWYGSGLLK QERSSTTEDE WRSSKLLKTD 60 EISPSKAMLF HQRNSLLRSN ATLFSDGHHQ QHMLSFSSPK PDSFLGDKAP PNATLPYSYH 120 PLSSYSRNTG YGSGSMHGAF SGAKGPFTPS QWMELEHQAL IYKYITANVP VPSHLLIPIR 180 KALDSAAFCN FSNGLLRPNA LAWGGFHLGY SNNTDPEPGR CRRTDGKKWR CSRDAVVDQK 240 YCERHINRGR HRSRKPVEGQ SGHALTNPTT TTTSTPNTSS KLNASSSVVV PHQEPSNNMH 300 LPPHSSPPNS INRMFMSNKE NNNTSERVQD GPALPMLPPT LELKPKENPF MIHKQKLPYD 360 ESSKNNNEFG LVTSDSLLNP SQKNSTTTLL SNRSFGSSQK DSESQHSLRH FIDESDMQSD 420 RTQLSISIPI SSSDFMSFTT SSPSNEKLTL SPLRLSRELD PIQMGLGVGS GLNESTTRQA 480 NWIPITWESS SMGGPLGEVL NLSSSNNSNA SDHCGKNTSA LNLMTDGWDS SPPLGSSPTG 540 VLQKTAFGSL SNSSAGSSPR AENNKEGATL CNDLLPAL

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MDLGVVGLDG LVGSDTCGFG SLASDPETKH NKWYGSGLLK QERSSTTEDE WRSSKLLKTD  60
EISPSKAMLF HQRNSLLRSN ATLFSDGHHQ QHMLSFSSPK PDSFLGDKAP PNATLPYSYH  120
PLSSYSRNTG YGSGSMHGAF SGAKGPFTPS QWMELEHQAL IYKYITANVP VPSHLLIPIR  180
KALDSAAFCN FSNGLLRPNA LAWGGFHLGY SNNTDPEPGR CRRTDGKKWR CSRDAVVDQK  240
YCERHINRGR HRSRKPVEGQ SGHALTNPTT TTTSTPNTSS KLNASSSVVV PHQEPSNNMH  300
LPPHSSPPNS INRMFMSNKE NNNTSERVQD GPALPMLPPT LELKPKENPF MIHKQKLPYD  360
ESSKNNNEFG LVTSDSLLNP SQKNSTTTLL SNRSFGSSQK DSESQHSLRH FIDESDMQSD  420
RTQLSISIPI SSSDFMSFTT SSPSNEKLTL SPLRLSRELD PIQMGLGVGS GLNESTTRQA  480
NWIPITWESS SMGGPLGEVL NLSSSNNSNA SDHCGKNTSA LNLMTDGWDS SPPLGSSPTG  540
VLQKTAFGSL SNSSAGSSPR AENNKEGATL CNDLLPAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-101	GRF family protein