PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332457.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C3H

Protein Properties

Length: 533aa MW: 61192.3 Da PI: 6.6163

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332457.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	22.3	2.3e-07	85	107	4	27
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 ++C ff+ G+C+ GdrC+F Hgp XP_027332457.1 85 VPCYFFFN-GFCNKGDRCSFLHGP 107 68****.***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence
MDEDLVKRNT DCVYFLASPL TCKKGAECEY RHNEIARLNP RDCWYWLSGH CLNPTCAFRH 60 PPLDGHTGVP SEPSPTSLPA NKTIVPCYFF FNGFCNKGDR CSFLHGPGDS FITVKPLKND 120 NGSTDALKLE NKTSSGNTTG VASTPIKTQF DRSLTAPKDL SDFEFQPMED RQLPLSKNVK 180 GHGDSLEISA LESKEATATR SDSVFPDDGF VHNISHLGTE QSSEEQVNSH IEPEERWESS 240 PHSPGFDVLV HDELENLGYE EDSEYFQVLD RDDQELNEQY LGYEFKDSVE YDTICPEADI 300 LYEQETYDDY RCFDRDLSHA NGRTVHAYPR EIILDSILSR KRIRMSAEMA AYDKKLDLRD 360 HLRRRREING PPVTGFLRRH ESSSLMARNQ ERHQRHGIDQ RLSRRLTSQL GFSAIDSIGE 420 VETLSIANKH RLLGNSQQHR PRKHFKEKLA KRQFISSKIS RKPVLKQRRF IHESITFSGP 480 KTLAEIKEEK RRAEENIHCK SMSSDFQDPK PLSEILKDKR TMDQVRDGNT CHK

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence

MDEDLVKRNT DCVYFLASPL TCKKGAECEY RHNEIARLNP RDCWYWLSGH CLNPTCAFRH  60
PPLDGHTGVP SEPSPTSLPA NKTIVPCYFF FNGFCNKGDR CSFLHGPGDS FITVKPLKND  120
NGSTDALKLE NKTSSGNTTG VASTPIKTQF DRSLTAPKDL SDFEFQPMED RQLPLSKNVK  180
GHGDSLEISA LESKEATATR SDSVFPDDGF VHNISHLGTE QSSEEQVNSH IEPEERWESS  240
PHSPGFDVLV HDELENLGYE EDSEYFQVLD RDDQELNEQY LGYEFKDSVE YDTICPEADI  300
LYEQETYDDY RCFDRDLSHA NGRTVHAYPR EIILDSILSR KRIRMSAEMA AYDKKLDLRD  360
HLRRRREING PPVTGFLRRH ESSSLMARNQ ERHQRHGIDQ RLSRRLTSQL GFSAIDSIGE  420
VETLSIANKH RLLGNSQQHR PRKHFKEKLA KRQFISSKIS RKPVLKQRRF IHESITFSGP  480
KTLAEIKEEK RRAEENIHCK SMSSDFQDPK PLSEILKDKR TMDQVRDGNT CHK