PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332489.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 333aa MW: 37580.5 Da PI: 6.6729

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332489.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.5e-17	20	67	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ lv++++ +G g+W+t a g++Rt+k+c++rw++yl XP_027332489.1 20 RGPWTVDEDDTLVNYIATHGEGRWNTLALSAGLKRTGKSCRLRWLNYL 67 89********************************************97 PP
2	Myb_DNA-binding	50.4	5e-16	73	116	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_027332489.1 73 RGNITLEEQLLILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 116 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MDVKGRGNNT LCEDEMDLRR GPWTVDEDDT LVNYIATHGE GRWNTLALSA GLKRTGKSCR 60 LRWLNYLRPD VRRGNITLEE QLLILELHSR WGNRWSKIAQ YLPGRTDNEI KNYWRTRVQK 120 HAKQLKCDVN SKQFKDTMRY LWMPRLVERI QAAAAASTTS ATTTTAATIS PTNLSTTTTV 180 TTNNGYNYGN NLNNNNFEVN NHGGKMGLTS SVMNNDLVGS QRAQSYTPEN SSTAASSSDS 240 FGTQVSTISD LNDYYSVPVS SNNNPNSIHY YQPSQMSYSD CITSPSGLFP QGLDFQAMEP 300 NNPWNMQSGD SSDNFWNVEN MLFLQQQLMN DNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06490.1	6e-84	MYB family protein