PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332600.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 398aa MW: 42656.3 Da PI: 8.1724

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.4	4.2e-41	72	217	2	115
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + XP_027332600.1 72 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrssy 166 789******************************************************************99987777777777555555555556 PP TCP 89 .......................kaaksaa.kskksqksaasalnlakesr 115 + ++s++ + +s++ +a++l+ ++e r XP_027332600.1 167 fnpnfsvqqrrtlfpgiglssesNTNTSTTlLNFQSNNLTATMLQAKQELR 217 666666666777777777776663333333244444444444444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MEGGDDFHHH HHRQNFPFQL LEKKEDQEAA SCSTSSPYPS LAISAEPTTS NSTRSNQLVP 60 VPPAEPAIKK PPPKRTSTKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG HKSDGETIEW 120 LLQQAEPAVI AATGTGTIPA NFTSLNISLR SSGSSMSVPS QLRSSYFNPN FSVQQRRTLF 180 PGIGLSSESN TNTSTTLLNF QSNNLTATML QAKQELRDGA PSSSTLDLSE TSAEEGLGRK 240 RRPVEQDLSS TQHQMGSYLL QSSAGAIPTC HAQIPANIWM VANSSNNQVM SGDPIWTFPQ 300 VNNSALYRGT VSSGLHFMNF PTPMALLPSQ QLGSSGIGGV GGSSGVGNIN MNEGHLSMLA 360 GLSPYRPVIG VSESQASGSQ SHRGGGSDDR HDSTSHHS

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MEGGDDFHHH HHRQNFPFQL LEKKEDQEAA SCSTSSPYPS LAISAEPTTS NSTRSNQLVP  60
VPPAEPAIKK PPPKRTSTKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG HKSDGETIEW  120
LLQQAEPAVI AATGTGTIPA NFTSLNISLR SSGSSMSVPS QLRSSYFNPN FSVQQRRTLF  180
PGIGLSSESN TNTSTTLLNF QSNNLTATML QAKQELRDGA PSSSTLDLSE TSAEEGLGRK  240
RRPVEQDLSS TQHQMGSYLL QSSAGAIPTC HAQIPANIWM VANSSNNQVM SGDPIWTFPQ  300
VNNSALYRGT VSSGLHFMNF PTPMALLPSQ QLGSSGIGGV GGSSGVGNIN MNEGHLSMLA  360
GLSPYRPVIG VSESQASGSQ SHRGGGSDDR HDSTSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	1e-51	TCP family protein