PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027332702.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 208aa    MW: 24478.9 Da    PI: 8.9557
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027332702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.43.7e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien+snrqvt+skR+ngilKKA+E+ vLCda+v++iif+ +gk+++y+s
  XP_027332702.1  9 KRIENSSNRQVTYSKRKNGILKKAKEITVLCDAQVSLIIFAASGKMHDYIS 59
                    79***********************************************86 PP
2K-box85.79.3e-2971167197
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     y+k+sgk+l++ak+e+l+ e+++Lkke++++q e+Rhl+Ged++sL++keL++Le++Le++l ++R+k++e++++  ++ +  e+e++e n   +
  XP_027332702.1  71 YHKTSGKRLWDAKHENLNSEIERLKKENDSMQIELRHLKGEDINSLNYKELMSLEDALENGLLSVREKQMEVYRMFRRNDKILEEENRELNFIWQ 165
                     7999*************************************************************************************998777 PP

           K-box  96 kk 97 
                     ++
  XP_027332702.1 166 QR 167
                     66 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MGRGKIEIKR IENSSNRQVT YSKRKNGILK KAKEITVLCD AQVSLIIFAA SGKMHDYISP  60
STTLIDVLER YHKTSGKRLW DAKHENLNSE IERLKKENDS MQIELRHLKG EDINSLNYKE  120
LMSLEDALEN GLLSVREKQM EVYRMFRRND KILEEENREL NFIWQQRMAV EGAREVDNGF  180
DQSVRDFNSQ MPFAFRVQPM QPNLQERI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.18e-88MIKC_MADS family protein