PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332851.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 161aa MW: 17879.3 Da PI: 5.6417

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	142.2	1.7e-44	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +Ca+Ck+lrr+C+kdC++apyfp ++p+kfa+vhk+FGasnv+k+l++lp ++r da+sslvyeA+arardPvyG+vg i+ lq+q+++l+ +la XP_027332851.1 6 PCASCKLLRRRCTKDCTFAPYFPPDEPQKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARARDPVYGCVGAISYLQNQVSELQMQLA 100 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_027332851.1 101 VAQAE 105 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MGGNSPCASC KLLRRRCTKD CTFAPYFPPD EPQKFAIVHK VFGASNVSKM LQELPVHQRA 60 DAVSSLVYEA NARARDPVYG CVGAISYLQN QVSELQMQLA VAQAEILCIQ MRNEQVIPVP 120 EIDSDQKSNI LQNDLSQYFN FGASSNVIYD SQSIFGHEMI S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	1e-76	LBD family protein