PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027332896.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 883aa    MW: 97371.4 Da    PI: 6.6653
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027332896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.99.7e-24117218199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_027332896.1 117 FCKTLTASDTSTHGGFSVPRRAAEKVfppldytQQPPAQ--ELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 207
                     99*****************************96555555..8************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_027332896.1 208 KNQLLLGIRRA 218
                     9999****997 PP
2Auxin_resp121.75.5e-40243326183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_027332896.1 243 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 326
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 883 aa     Download sequence    
MKLSSSGFNQ PAEEEGEKKC LNSELWHACA GPLVSLPPVG SRVVYFPQGH SEQVAASTNR  60
EVDAHIPNYP NLPPQLICQL HNVTMHADAE TDEQEQKEVY LLPAELGAPS KQPTNYFCKT  120
LTASDTSTHG GFSVPRRAAE KVFPPLDYTQ QPPAQELIAR DLHDNEWKFR HIFRGQPKRH  180
LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTIMPSSVL SSDSMHIGLL  240
AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM LFETEESSVR  300
RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT TFPMYPSPFP  360
LRLRRPWPSG LPSLYGLKDG DMNIGSPFMW LQSGLGDQGM QSLSFQGLGV TPWMQPRLDA  420
SIPGLQPDLY QAMASAAFQE MRTMDPAKSS QSLLQFQQTS NVPSAHTSEV QRQVLPQSQP  480
QNTLLHSFPE NQVPAQSQLL QQQLHRYHPY NDQRQQQQQL KNLPVQQQLP NVISPLSNFA  540
SGTQSQSPPM QALGSHCQQQ SFPEPIRNHI SGSDVSPIQS LLSSFSQDGS SQLHNLNGSN  600
SVISSAAILP KQIAVEPQLA SAAAHGILPQ VENLGASQSN VSELTALPPF PGREHSAYHG  660
AADPQSNLLF GINIDPSSLM LQNGMSNLRN IGNVNDSLSL PFPASNCGGA TGTDFPLSSN  720
MTTSSCVDES GFLQSSENVD QANTPTGTFV KVHKSGSFGR SLDISKFSSY DELRSELARM  780
FGLEGQLEDP KTQRSGWQLV FVDRENDVLL LGDDPWQEFV NNVWHIKILS PLEVQQMGKG  840
LSPSTSAPGH KLPTAGNSCD NYVNQQELRS PRSGMASMGS FHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein