PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027333179.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 552aa MW: 61000.4 Da PI: 7.4683

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027333179.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00069	465	487	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F++ L H r+H XP_027333179.1 465 HECPICFKVFPSGQALGGHKRSH 487 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MRSHVTNLSA ETEEKEKLAT RKPSSSLNNG VDKDSEAATN AGYGLRENPK KTWRIENYSS 60 EDTLVVFDKF CKECGKGFQS WKALFGHMKC HSEKERVSNS LEDQDSWTDN NNANSSHKMV 120 MDSQSDNEAT APNRRRRSKR RTRYMVAAAA AATTSSVVSF TNPSSSLSEV EQEQEEVAMS 180 LMMLSRDVSP WSGLHSVAES SDNNSACFEA RSSVRTNLVT KFEGSNKFNP TSKSNIAKPI 240 KQSDKKGEVG DSASQKPNSI KGKSSELLAT TEFPENGFRM SKVGVSNKGF IKDEKVNKSE 300 LDYVSTLEDS EGEHGRNRVN GTESVLSKSA TPVSNKHSSI KTKFFGSELK SNYSLKNWVD 360 KASEAESSKN SHKRGKFECT TCNKIFHSYQ ALGGHRASHK KIKGCFASKN ESSENSIETE 420 LSPDPTTESK LMKNSGNEYL VEHGHGPGFH NEVDTVTESK KSKGHECPIC FKVFPSGQAL 480 GGHKRSHMVG GSESRNFQTV VLEEPVPEIR DLLDLNLPAA TEEESNSHAD SNRPWWVVED 540 NHKQEALVGL IS

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MRSHVTNLSA ETEEKEKLAT RKPSSSLNNG VDKDSEAATN AGYGLRENPK KTWRIENYSS  60
EDTLVVFDKF CKECGKGFQS WKALFGHMKC HSEKERVSNS LEDQDSWTDN NNANSSHKMV  120
MDSQSDNEAT APNRRRRSKR RTRYMVAAAA AATTSSVVSF TNPSSSLSEV EQEQEEVAMS  180
LMMLSRDVSP WSGLHSVAES SDNNSACFEA RSSVRTNLVT KFEGSNKFNP TSKSNIAKPI  240
KQSDKKGEVG DSASQKPNSI KGKSSELLAT TEFPENGFRM SKVGVSNKGF IKDEKVNKSE  300
LDYVSTLEDS EGEHGRNRVN GTESVLSKSA TPVSNKHSSI KTKFFGSELK SNYSLKNWVD  360
KASEAESSKN SHKRGKFECT TCNKIFHSYQ ALGGHRASHK KIKGCFASKN ESSENSIETE  420
LSPDPTTESK LMKNSGNEYL VEHGHGPGFH NEVDTVTESK KSKGHECPIC FKVFPSGQAL  480
GGHKRSHMVG GSESRNFQTV VLEEPVPEIR DLLDLNLPAA TEEESNSHAD SNRPWWVVED  540
NHKQEALVGL IS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	2e-29	C2H2 family protein