PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027333512.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 216aa MW: 24740.4 Da PI: 9.1545

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027333512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.2	1.4e-18	85	139	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Le+ F+ +++++ +++ LA++l+L++rqV vWFqNrRa+ k XP_027333512.1 85 RKKLRLTKEQSAMLENTFKLHSTLNPVQKQALADQLNLKTRQVEVWFQNRRARTK 139 678899***********************************************98 PP
2	HD-ZIP_I/II	109.7	2e-35	85	173	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq+++LE++F+ +++L+p +K++la +L+l++rqv+vWFqnrRARtk+kq+E+d e Lk+++++l++en+rL+ke +eLr + XP_027333512.1 85 RKKLRLTKEQSAMLENTFKLHSTLNPVQKQALADQLNLKTRQVEVWFQNRRARTKLKQTEVDRELLKKHCQNLSDENKRLKKELQELR-A 173 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MEDDGECITG LHLGLGMGGH VPRKEKQKEN KPEVCLELAF ELCPKGEAID VNHNKANRIS 60 LERIHEYPNE KSTDSDNSNN KNGCRKKLRL TKEQSAMLEN TFKLHSTLNP VQKQALADQL 120 NLKTRQVEVW FQNRRARTKL KQTEVDRELL KKHCQNLSDE NKRLKKELQE LRALKVGPSP 180 LCIQLSKTAT LTMCSSCEKL IKLNEAKNNI ELESRN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	142	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	6e-50	HD-ZIP family protein