PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027333679.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LBD
Protein Properties Length: 156aa    MW: 17588.1 Da    PI: 8.0416
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027333679.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260124.84.4e-3951051101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk +rr+C++dC+++pyfpa++p++fa+vh+++G snv k+l+++p+  re+a++sl++eA++r++dPvyG++g+i+kl+qq+++++  la
  XP_027333679.1   5 RCAACKSQRRRCPSDCIFSPYFPANDPQRFACVHRIYGGSNVGKMLQQIPPYLREQAANSLYFEAQCRIQDPVYGCAGIISKLSQQIHSTEIALA 99 
                     6*******************************************************************************************999 PP

          DUF260  96 llkeel 101
                     ++++++
  XP_027333679.1 100 KIQTQI 105
                     999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MISGRCAACK SQRRRCPSDC IFSPYFPAND PQRFACVHRI YGGSNVGKML QQIPPYLREQ  60
AANSLYFEAQ CRIQDPVYGC AGIISKLSQQ IHSTEIALAK IQTQIAYHKL QIPRTEIESN  120
FNVLSTIEAE SNLDVLPPQS SSMGEFQWPL QASWFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26620.13e-50LBD family protein