PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027333746.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 243aa    MW: 27969.9 Da    PI: 8.4417
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027333746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.67.8e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+ienk+nrqvtfskR+ng+ KKA ELSvLCdaeva+iifss+gkl  ++s
  XP_027333746.1  9 KKIENKINRQVTFSKRKNGLVKKARELSVLCDAEVALIIFSSRGKLTQFAS 59
                    68*********************************************9986 PP
2K-box94.71.5e-31821739100
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     + e++++s++qe++ Lk+++e+Lq +qRhllGedL++L++keLq++e+qLe +l++ R++K+++++eq+eel  ke+ l ++nk+Lr klee
  XP_027333746.1  82 NVERETQSWYQEVSMLKAKYESLQMTQRHLLGEDLGPLNIKELQNIEKQLEGALSQARQRKTQIMIEQMEELWIKERHLGDINKQLRLKLEE 173
                     567889***********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGRGKVELKK IENKINRQVT FSKRKNGLVK KARELSVLCD AEVALIIFSS RGKLTQFASA  60
GSGITKTLER YQRFSFTHLD NNVERETQSW YQEVSMLKAK YESLQMTQRH LLGEDLGPLN  120
IKELQNIEKQ LEGALSQARQ RKTQIMIEQM EELWIKERHL GDINKQLRLK LEEDGFNLKA  180
IESLWSSTSV ASEDGSFPFL HSQINPMDFQ AESFLQIGYS QAEPSNVPRN MADETNFIQG  240
WII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.17e-97MIKC_MADS family protein