PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027333786.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 233aa    MW: 27076.9 Da    PI: 9.6954
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027333786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF953.3e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+iifs++gkl+eyss
  XP_027333786.1  9 KRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLFEYSS 59
                    79***********************************************96 PP
2K-box104.81.1e-34761742100
           K-box   2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                     ++++ +  ++a +e++  e+akLk+++e Lqr+qR+++Ge+L+sLs+keLq+LeqqL++++k+iRs+Kn++++e+i+elqkk k+lqe+n+ L k
  XP_027333786.1  76 AERQLVGDDQAPNENWVIEHAKLKARMEVLQRNQRNFKGEELDSLSIKELQNLEQQLDSAIKRIRSRKNQVMYESISELQKKDKALQEHNNLLAK 170
                     5566677778889********************************************************************************** PP

           K-box  97 klee 100
                     k++e
  XP_027333786.1 171 KIKE 174
                     *987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KANEISVLCD AEVALIIFST KGKLFEYSSD  60
PCMERVIERY ERYSYAERQL VGDDQAPNEN WVIEHAKLKA RMEVLQRNQR NFKGEELDSL  120
SIKELQNLEQ QLDSAIKRIR SRKNQVMYES ISELQKKDKA LQEHNNLLAK KIKEKEKALA  180
QQEQRGVHNN ADMNSVLVTQ PLEYLNIGCN EETPTPTRAN TILPPWLPRP TTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.11e-102MIKC_MADS family protein