PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027333856.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 514aa MW: 58069.7 Da PI: 6.3824

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027333856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.2	2.2e-11	326	371	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h + ErrRR+++N++f+ L +lP+ +K +Ka+iL+ A e +ksL XP_027333856.1 326 NHIISERRRREKLNESFQALGAILPPG-----TKKDKASILTTAKETMKSL 371 7999*******************97.....8***********99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MDGVFALPQA ARTDFLRSLV HSFGCAYVCL WRHDSDLYNR LFFLDGFYNV TNNQLQPSTS 60 LGSTLAKTLF HQYQRLTFDV NDDCVPGVAF RNHLPYLELQ QLDLLRLSST EIQKQFIEEA 120 RIMTAVFMGC NKGEIELGFS YMSQGDIQRA LWSLFPEDFS THCQSIHQKN PPSSTSSSSS 180 FISLSTGSPE ITLGVVPAMP TTQTSPQQQR MEPLAQVIPS HFPTPEGEDD ALIRAFLHVI 240 SSPSSSTSQQ HQPQQNLPDY TSVVRRESTA FKRYRSDVST NVTPQMGSNF QRQSLLNRSF 300 SLLRSLNFVR MREPIHVAPP TGTQLNHIIS ERRRREKLNE SFQALGAILP PGTKKDKASI 360 LTTAKETMKS LMDEIEKLYI SNQQLMTFLS EKGALSTEEN IAISSNERFK VEVSDVLESS 420 SSEGRMVDLQ VISVRGESSQ VDILIRLLRF LERLQNVSLI SMAANNHITQ RAAINQLTFR 480 LRILEGSEWD EPAFLEAVRR VVDDLVQCQV DQSF

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MDGVFALPQA ARTDFLRSLV HSFGCAYVCL WRHDSDLYNR LFFLDGFYNV TNNQLQPSTS  60
LGSTLAKTLF HQYQRLTFDV NDDCVPGVAF RNHLPYLELQ QLDLLRLSST EIQKQFIEEA  120
RIMTAVFMGC NKGEIELGFS YMSQGDIQRA LWSLFPEDFS THCQSIHQKN PPSSTSSSSS  180
FISLSTGSPE ITLGVVPAMP TTQTSPQQQR MEPLAQVIPS HFPTPEGEDD ALIRAFLHVI  240
SSPSSSTSQQ HQPQQNLPDY TSVVRRESTA FKRYRSDVST NVTPQMGSNF QRQSLLNRSF  300
SLLRSLNFVR MREPIHVAPP TGTQLNHIIS ERRRREKLNE SFQALGAILP PGTKKDKASI  360
LTTAKETMKS LMDEIEKLYI SNQQLMTFLS EKGALSTEEN IAISSNERFK VEVSDVLESS  420
SSEGRMVDLQ VISVRGESSQ VDILIRLLRF LERLQNVSLI SMAANNHITQ RAAINQLTFR  480
LRILEGSEWD EPAFLEAVRR VVDDLVQCQV DQSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	331	336	ERRRRE
2	332	337	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	4e-28	bHLH family protein