PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334067.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Protein Properties

Length: 864aa MW: 95711.9 Da PI: 7.7076

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.1	3.8e-19	327	427	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++ e++ l+++d +g++W++++++ +++s++yvl+ G ++ +L +gD+v+F++++ +++ XP_027334067.1 327 FEKVLSASDAGRIGRLVLPKACAEAYfpSISQSEGVPLRVQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLHAGDTVTFSRID-PGGK 419 99************************777789999***********99899999999.*******************887.7888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++++ XP_027334067.1 420 LVMGFRKA 427 88887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 864 aa Download sequence
MGSDICVVNG SCTHDWRKGW PLRSDGFAQL CCKCGSAYEN SVFCNKFHRQ QTGWGECYFC 60 NKPIHCGCIV SRSLFEYLDF GGIGCVSCVN TSQLSMMRNT ENPNGSVSST KNNASDRHSA 120 QFDGRLFMGG VDEGKLMQFC KIVEASESSC WNQAQRDGLV ARTGQSSQEA NNCSFRERDT 180 GFSNVMKSSV QSLTFATVEN NRSTWEIKNS HESNSQQSLN MYLGNPSGSN SVPPPAGEAV 240 EGRLEGKASH PFHQAQRSRP IFPKPLKTGL TMNMETDKGT TSQSRIARPP AEGRGKNQLL 300 PRYWPRITDQ ELERLAGDLK STVVPLFEKV LSASDAGRIG RLVLPKACAE AYFPSISQSE 360 GVPLRVQDVK GNEWTFQFRF WPNNNSRMYV LEGVTPCIQS MQLHAGDTVT FSRIDPGGKL 420 VMGFRKASNS TDTQDASTSA QSNGISAKGT TFSGGTENHS GTGTAGLLKI ESYEMTNNNS 480 LQQQISVLEK KRTRNIGPKS KRLLIDSEDA MELKLTWEEA QDLLRPPPSV KPSIVTIEDQ 540 VFEEYDEPPV FGKRTLFSAC SSGGKEQWAQ CDDCSKWRKL PVDALLPPKW TCSENVWDSS 600 RSSCSALEEL SSRELENLLK TSKDIKKRRI IESNKSIQEP EPSGLDALAS AAVLGENLLD 660 PAAESSTGAT TKHPRHRPGC SCIVCIQPPS GKGRHKPTCT CNVCMTVKRR FKTLMLRKKK 720 RQSEREADAA QKDQVHQKDE SDATGASRDD TSHLEKEGGL KRSQHEVGES CAGQIDLNSH 780 PNREDMQVDT TALGMPSHLE TTNHTPREYV NQNGLRSFNS ELHANDHSLH TQSNERCFTS 840 IVWNQEKRKD DVHNHPNQSQ NNLS

Sequence ? help Back to Top

Protein Sequence Length: 864 aa Download sequence

MGSDICVVNG SCTHDWRKGW PLRSDGFAQL CCKCGSAYEN SVFCNKFHRQ QTGWGECYFC  60
NKPIHCGCIV SRSLFEYLDF GGIGCVSCVN TSQLSMMRNT ENPNGSVSST KNNASDRHSA  120
QFDGRLFMGG VDEGKLMQFC KIVEASESSC WNQAQRDGLV ARTGQSSQEA NNCSFRERDT  180
GFSNVMKSSV QSLTFATVEN NRSTWEIKNS HESNSQQSLN MYLGNPSGSN SVPPPAGEAV  240
EGRLEGKASH PFHQAQRSRP IFPKPLKTGL TMNMETDKGT TSQSRIARPP AEGRGKNQLL  300
PRYWPRITDQ ELERLAGDLK STVVPLFEKV LSASDAGRIG RLVLPKACAE AYFPSISQSE  360
GVPLRVQDVK GNEWTFQFRF WPNNNSRMYV LEGVTPCIQS MQLHAGDTVT FSRIDPGGKL  420
VMGFRKASNS TDTQDASTSA QSNGISAKGT TFSGGTENHS GTGTAGLLKI ESYEMTNNNS  480
LQQQISVLEK KRTRNIGPKS KRLLIDSEDA MELKLTWEEA QDLLRPPPSV KPSIVTIEDQ  540
VFEEYDEPPV FGKRTLFSAC SSGGKEQWAQ CDDCSKWRKL PVDALLPPKW TCSENVWDSS  600
RSSCSALEEL SSRELENLLK TSKDIKKRRI IESNKSIQEP EPSGLDALAS AAVLGENLLD  660
PAAESSTGAT TKHPRHRPGC SCIVCIQPPS GKGRHKPTCT CNVCMTVKRR FKTLMLRKKK  720
RQSEREADAA QKDQVHQKDE SDATGASRDD TSHLEKEGGL KRSQHEVGES CAGQIDLNSH  780
PNREDMQVDT TALGMPSHLE TTNHTPREYV NQNGLRSFNS ELHANDHSLH TQSNERCFTS  840
IVWNQEKRKD DVHNHPNQSQ NNLS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	708	719	KRRFKTLMLRKK
2	708	721	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein