PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027334120.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LBD
Protein Properties Length: 166aa    MW: 18579.2 Da    PI: 6.1342
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027334120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260140.65.1e-4461051100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+CakdC++apyfp+++p+kfa vhk+FGasnv+k+l++l  ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q+++l+ +la
  XP_027334120.1   6 PCASCKLLRRRCAKDCIFAPYFPSDDPQKFALVHKVFGASNVSKMLQELAVHQRADAVSSLVYEAHARVRDPVYGCVGAISYLQNQVSELQMQLA 100
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_027334120.1 101 VAQAE 105
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MAGNSPCASC KLLRRRCAKD CIFAPYFPSD DPQKFALVHK VFGASNVSKM LQELAVHQRA  60
DAVSSLVYEA HARVRDPVYG CVGAISYLQN QVSELQMQLA VAQAEILCIQ MQHEPMMPNP  120
EIEEDPNHKS YLLQNDIPQY LNHASSNNVI YDSLSRETIF GHDIVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.13e-76LBD family protein