PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334323.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 727aa MW: 81452.4 Da PI: 7.8074

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74	1.7e-23	154	254	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k+lt sd++++g +++ +k+a+e+ + +++ +++l +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +vF + +++ XP_027334323.1 154 FCKILTASDTSTHGGFSVLRKHATEClppldMTPPTPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFL--RGEQG 246 99**************************9667777789********************************************..44999 PP ..EEEEE- CS B3 91 elvvkvfr 98 +l+v+v+r XP_027334323.1 247 QLRVGVRR 254 9***98 PP
2	Auxin_resp	102.6	5e-34	280	359	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+ t+++F v+Y+Pr+ s+F+v ++++++a+++k+svGmRfkm+fe++ds+err+sGt+vgv d++p W+nS+WrsLk XP_027334323.1 280 ASHAVMTRTMFLVYYKPRT--SQFIVGLNRYLEAVNNKFSVGMRFKMRFEGDDSPERRFSGTIVGVGDASP-GWSNSQWRSLK 359 689*************6..9******************************************999.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 727 aa Download sequence
MEVVCRAFGG CSSYWRQSFL LPSGSHGTSM FFFSSIFVAI FGLWLVAFKF WCKPNQTTFL 60 VVLAYETFWP SGFFFFLLLL QLQASTDQEL NQEIPHFNLP SKIFCRVVNI QLLAEQDTDE 120 VYACIALLPE SDQTEPINPD LDVSEAPKQK FHSFCKILTA SDTSTHGGFS VLRKHATECL 180 PPLDMTPPTP TQELAAKDLH GFEWKFKHIY RGQPRRHLLT TGWSTFVASK RLVAGDAFVF 240 LRGEQGQLRV GVRRLARQQS PMPSSVISSQ SMHLGVLATA SHAVMTRTMF LVYYKPRTSQ 300 FIVGLNRYLE AVNNKFSVGM RFKMRFEGDD SPERRFSGTI VGVGDASPGW SNSQWRSLKV 360 QWDEPATIPR PDRVSCWEIE PFVASTALNV TQPVVKGKRS RPNDVSSSAA SGLWYHGSSH 420 SHELTQLGGA AEVQSKENQV VCSLRQKDVN NNPINANSSS SRARMEGMWS SSPHLNVTSN 480 LFSDPNNKNS VTVRSSISSY PNVSSRSSDG PTAEDVKKTE NSLDCWLFGV NLTNKSTIVI 540 TPSKRELRCP SLTIVPSGPK ESIPAAACES GRVQTPNYSL SNKGQKQIIS DASPNEWQNK 600 QATVPSMRTR TKVQMQGVAV GRALDLTMLN GYDDLIEEIE KLFDIKEELR SQNKWAVTFT 660 DDENDMMLVG DDPWPEFCNM VKRIFVCLRE DLKKMKCKLP TSSSEVEETL LSPDSQNRDE 720 TQHSHMP

Sequence ? help Back to Top

Protein Sequence Length: 727 aa Download sequence

MEVVCRAFGG CSSYWRQSFL LPSGSHGTSM FFFSSIFVAI FGLWLVAFKF WCKPNQTTFL  60
VVLAYETFWP SGFFFFLLLL QLQASTDQEL NQEIPHFNLP SKIFCRVVNI QLLAEQDTDE  120
VYACIALLPE SDQTEPINPD LDVSEAPKQK FHSFCKILTA SDTSTHGGFS VLRKHATECL  180
PPLDMTPPTP TQELAAKDLH GFEWKFKHIY RGQPRRHLLT TGWSTFVASK RLVAGDAFVF  240
LRGEQGQLRV GVRRLARQQS PMPSSVISSQ SMHLGVLATA SHAVMTRTMF LVYYKPRTSQ  300
FIVGLNRYLE AVNNKFSVGM RFKMRFEGDD SPERRFSGTI VGVGDASPGW SNSQWRSLKV  360
QWDEPATIPR PDRVSCWEIE PFVASTALNV TQPVVKGKRS RPNDVSSSAA SGLWYHGSSH  420
SHELTQLGGA AEVQSKENQV VCSLRQKDVN NNPINANSSS SRARMEGMWS SSPHLNVTSN  480
LFSDPNNKNS VTVRSSISSY PNVSSRSSDG PTAEDVKKTE NSLDCWLFGV NLTNKSTIVI  540
TPSKRELRCP SLTIVPSGPK ESIPAAACES GRVQTPNYSL SNKGQKQIIS DASPNEWQNK  600
QATVPSMRTR TKVQMQGVAV GRALDLTMLN GYDDLIEEIE KLFDIKEELR SQNKWAVTFT  660
DDENDMMLVG DDPWPEFCNM VKRIFVCLRE DLKKMKCKLP TSSSEVEETL LSPDSQNRDE  720
TQHSHMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.2	0.0	ARF family protein