PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334326.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 686aa MW: 76660.7 Da PI: 7.4686

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.2	1.6e-23	132	232	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k+lt sd++++g +++ +k+a+e+ + +++ +++l +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +vF + +++ XP_027334326.1 132 FCKILTASDTSTHGGFSVLRKHATEClppldMTPPTPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFL--RGEQG 224 99**************************9667777789********************************************..44999 PP ..EEEEE- CS B3 91 elvvkvfr 98 +l+v+v+r XP_027334326.1 225 QLRVGVRR 232 9***98 PP
2	Auxin_resp	102.7	4.6e-34	258	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+ t+++F v+Y+Pr+ s+F+v ++++++a+++k+svGmRfkm+fe++ds+err+sGt+vgv d++p W+nS+WrsLk XP_027334326.1 258 ASHAVMTRTMFLVYYKPRT--SQFIVGLNRYLEAVNNKFSVGMRFKMRFEGDDSPERRFSGTIVGVGDASP-GWSNSQWRSLK 337 689*************6..9******************************************999.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MAHLQCNLRG PGSGCSQPEK GLKDDDLYRE LWKLCAGPLV DVPRTGDRVF YFPQGHMEQL 60 QASTDQELNQ EIPHFNLPSK IFCRVVNIQL LAEQDTDEVY ACIALLPESD QTEPINPDLD 120 VSEAPKQKFH SFCKILTASD TSTHGGFSVL RKHATECLPP LDMTPPTPTQ ELAAKDLHGF 180 EWKFKHIYRG QPRRHLLTTG WSTFVASKRL VAGDAFVFLR GEQGQLRVGV RRLARQQSPM 240 PSSVISSQSM HLGVLATASH AVMTRTMFLV YYKPRTSQFI VGLNRYLEAV NNKFSVGMRF 300 KMRFEGDDSP ERRFSGTIVG VGDASPGWSN SQWRSLKVQW DEPATIPRPD RVSCWEIEPF 360 VASTALNVTQ PVVKGKRSRP NDVSSSGGAA EVQSKENQVV CSLRQKDVNN NPINANSSSS 420 RARMEGMWSS SPHLNVTSNL FSDPNNKNSV TVRSSISSYP NVSSRSSDGP TAEDVKKTEN 480 SLDCWLFGVN LTNKSTIVIT PSKRELRCPS LTIVPSGPKE SIPAAACESG RVQTPNYSLS 540 NKGQKQIISD ASPNEWQNKQ ATVPSMRTRT KVQMQGVAVG RALDLTMLNG YDDLIEEIEK 600 LFDIKEELRS QNKWAVTFTD DENDMMLVGD DPWPEFCNMV KRIFVCLRED LKKMKCKLPT 660 SSSEVEETLL SPDSQNRDET QHSHMP

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MAHLQCNLRG PGSGCSQPEK GLKDDDLYRE LWKLCAGPLV DVPRTGDRVF YFPQGHMEQL  60
QASTDQELNQ EIPHFNLPSK IFCRVVNIQL LAEQDTDEVY ACIALLPESD QTEPINPDLD  120
VSEAPKQKFH SFCKILTASD TSTHGGFSVL RKHATECLPP LDMTPPTPTQ ELAAKDLHGF  180
EWKFKHIYRG QPRRHLLTTG WSTFVASKRL VAGDAFVFLR GEQGQLRVGV RRLARQQSPM  240
PSSVISSQSM HLGVLATASH AVMTRTMFLV YYKPRTSQFI VGLNRYLEAV NNKFSVGMRF  300
KMRFEGDDSP ERRFSGTIVG VGDASPGWSN SQWRSLKVQW DEPATIPRPD RVSCWEIEPF  360
VASTALNVTQ PVVKGKRSRP NDVSSSGGAA EVQSKENQVV CSLRQKDVNN NPINANSSSS  420
RARMEGMWSS SPHLNVTSNL FSDPNNKNSV TVRSSISSYP NVSSRSSDGP TAEDVKKTEN  480
SLDCWLFGVN LTNKSTIVIT PSKRELRCPS LTIVPSGPKE SIPAAACESG RVQTPNYSLS  540
NKGQKQIISD ASPNEWQNKQ ATVPSMRTRT KVQMQGVAVG RALDLTMLNG YDDLIEEIEK  600
LFDIKEELRS QNKWAVTFTD DENDMMLVGD DPWPEFCNMV KRIFVCLRED LKKMKCKLPT  660
SSSEVEETLL SPDSQNRDET QHSHMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein