PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027334452.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 266aa    MW: 30246.2 Da    PI: 8.5842
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027334452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.99.9e-181360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+ eEde l ++v+ +G g W ++a+  g++R++k+c+ rw++yl
   XP_027334452.1 13 KGAWSREEDETLSKYVAIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYL 60
                     79********************************************97 PP
2Myb_DNA-binding47.44.3e-1566110147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg  + +E++ +++++++lG++ W++Ia++++ gRt++++k++w++ 
   XP_027334452.1  66 RGDISVDEEDMIIRLHRLLGNR-WALIAKRLP-GRTDNEIKNYWNTN 110
                      5667899***************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MGRRPCCPKE INKGAWSREE DETLSKYVAI HGEGKWQKVA QNAGLKRCGK SCRQRWLNYL  60
KPGIKRGDIS VDEEDMIIRL HRLLGNRWAL IAKRLPGRTD NEIKNYWNTN LSKKLQKQPT  120
STSASSIQHK YEEEKTIKMH VALEAPRPRK VKSIQNSKIL ETGGCDRHST TPSPSNKLEG  180
SSDETSFTDF LIDIDQNQLL IGDESNSKLP EIEKDHNNKV GLNNSPSLLS PSDHCQNLLQ  240
EKFDPLETLL DVELKRMASF LGLEND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.11e-53MYB family protein