PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334563.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

G2-like

Protein Properties

Length: 546aa MW: 60843.4 Da PI: 6.284

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334563.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88	9.1e-28	301	355	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++Fv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_027334563.1 301 KMKVDWTPELHKNFVKAVEQL-GIDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 355 5689***************.******************************96 PP
2	Myb_DNA-binding	42.8	1.2e-13	304	353	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++ +v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_027334563.1 304 VDWTPELHKNFVKAVEQLGIDqaIPSRILELMKvEGLTRHNVASHLQKYR 353 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MVCTANDLQE WKDFPKGLKV LLLEGDRTSA AEIRAKLEAM DYNALSAISS GPESFHIAIV 60 EVSSSSQGGF KFLENAKDLP TIMTSNNHCL NTMMKCIALG AVEFLNKPLS EDKLRNIWQH 120 VVHKAFSAGE SILSESLKPI KETVMAKLQT DNEQHEGRVS ENGSRFTDND DHEQSPGNDK 180 YPAPSTPQLE QGTRLLDDGD CQEQTNCSTE KESGGEHDGE SKFVETTCGN LNAESTPQQR 240 KSESTSVKDE EDFADASKNE SIASPHTQNT KGVSNIERHT TSSNKVGIHG DSYEIKINRK 300 KMKVDWTPEL HKNFVKAVEQ LGIDQAIPSR ILELMKVEGL TRHNVASHLQ KYRMHKRHIL 360 PKEDDRKWLN QRDTMQRSYC LQRPIMAFPP YHSNHTLSLA PVYPMWGQSG NQTAGMHIWH 420 PPGYPLWQQP TENWQWKPFP GMHADAWGCP VLPVQPPQAP CFPYSSNMPA LLNADAVDHT 480 CSMPQSSVEH YPAEEVVDKV VKEAINKPWL PLPLGLKPPS TDSVMAELSR QGISSIPPAT 540 KGSNSG

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MVCTANDLQE WKDFPKGLKV LLLEGDRTSA AEIRAKLEAM DYNALSAISS GPESFHIAIV  60
EVSSSSQGGF KFLENAKDLP TIMTSNNHCL NTMMKCIALG AVEFLNKPLS EDKLRNIWQH  120
VVHKAFSAGE SILSESLKPI KETVMAKLQT DNEQHEGRVS ENGSRFTDND DHEQSPGNDK  180
YPAPSTPQLE QGTRLLDDGD CQEQTNCSTE KESGGEHDGE SKFVETTCGN LNAESTPQQR  240
KSESTSVKDE EDFADASKNE SIASPHTQNT KGVSNIERHT TSSNKVGIHG DSYEIKINRK  300
KMKVDWTPEL HKNFVKAVEQ LGIDQAIPSR ILELMKVEGL TRHNVASHLQ KYRMHKRHIL  360
PKEDDRKWLN QRDTMQRSYC LQRPIMAFPP YHSNHTLSLA PVYPMWGQSG NQTAGMHIWH  420
PPGYPLWQQP TENWQWKPFP GMHADAWGCP VLPVQPPQAP CFPYSSNMPA LLNADAVDHT  480
CSMPQSSVEH YPAEEVVDKV VKEAINKPWL PLPLGLKPPS TDSVMAELSR QGISSIPPAT  540
KGSNSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-126	ARR-B family protein