PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027334620.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 830aa    MW: 90663.6 Da    PI: 6.1861
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027334620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.48e-21128183156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+++l L++rqVk+WFqNrR+++k
  XP_027334620.1 128 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMK 183
                     688999***********************************************999 PP
2START206.51.1e-643365601206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvk+a+ +ep+W +      +++n +e++++f++  +     + +ea r+ g+v+ ++  lve+l+d++ +W e+++    + +t+
  XP_027334620.1 336 ELALAAMDELVKMAQTGEPLWIRNIeggrDILNHEEYMRTFTPCIGlrpngFVSEATRENGMVIINSLALVETLMDSN-RWAEMFPciiaRSSTT 429
                     5899**************************************9999****9***************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     evis+g      galqlm aelq+ls lvp R++ f+R+++q+ +g+w++vdvS+d  ++ +  +s+v +++lpSg+++++++ng+skvtwveh+
  XP_027334620.1 430 EVISNGingtrnGALQLMHAELQVLSALVPvREVNFLRFCKQHAEGVWAVVDVSIDTIRESSGAPSFVNCRRLPSGCVVQDMPNGYSKVTWVEHA 524
                     ************************************************************999******************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++++h+++rsl++sg+ +ga++wvatlqrqce+
  XP_027334620.1 525 EYDESQVHQMYRSLLSSGMGFGAQRWVATLQRQCEC 560
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 830 aa     Download sequence    
MSFGGFLDNN TGSGGARNVS DIAYNNVTTT HHNNNNDRMP FAAISQPRLV TTTPTLAKSM  60
FHSPGLSLAL QQTNVDGQED VNRMAENSFE PNGLRRSREE EHESRSGSDN MDGASGDEHD  120
AADNPPRKKR YHRHTPQQIQ ELEALFKECP HPDEKQRLEL SRRLCLETRQ VKFWFQNRRT  180
QMKTQLERHE NTLLRQENDK LRAENMSIRD AMRNPMCSNC GGPAIIGEIS LEEQHLRIEN  240
ARLKDELDRV CALAGKFLGR PISSLANSIA PPLPNSSLEL GVGGNGFGGI NTVPSTLPDF  300
TVGMSNPLAM VSPTSTRPMT VVAGFDRSME RSMFLELALA AMDELVKMAQ TGEPLWIRNI  360
EGGRDILNHE EYMRTFTPCI GLRPNGFVSE ATRENGMVII NSLALVETLM DSNRWAEMFP  420
CIIARSSTTE VISNGINGTR NGALQLMHAE LQVLSALVPV REVNFLRFCK QHAEGVWAVV  480
DVSIDTIRES SGAPSFVNCR RLPSGCVVQD MPNGYSKVTW VEHAEYDESQ VHQMYRSLLS  540
SGMGFGAQRW VATLQRQCEC LAILMSSAAP SRDHSAITAG GRRSMLKLAQ RMTNNFCAGV  600
CASTVHKWNK LNAGNVDEDV RVMTRKSVDD PGEPPGIVLS AATSVWLPVS PQRLFDFLRD  660
ETLRSEWDIL SNGGPMQEMA HIAKGQDHGN CVSLLRASAM NSNQSSMLIL QETCIDAAGS  720
LVVYAPVDIP AMHVVMNGGD SAYVALLPSG FAIVPDGPGS RGPQNGPTTT TNGGDNSGGA  780
GVSGSLLTVA FQILVNSLPT AKLTVESVET VNNLISCTVQ KIKAALQCES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein