PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334800.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 218aa MW: 24972.5 Da PI: 10.1036

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.2	1.4e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_027334800.1 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 79***********************************************86 PP
2	K-box	91	2.1e-30	83	172	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 e+++++l+qe+a++ k+i+ L+ ++R+l+Ge+L+s+s+ eLq++eqqLe+sl+++R++K+++++eq+e+l++kek+l +en +L++k XP_027334800.1 83 SIEQNMQYLKQEAANMMKKIDLLEASKRKLMGEGLGSCSIDELQRMEQQLERSLSNVRARKTQFFREQVEQLKEKEKALVDENARLSEKC 172 45899*********************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MVRGKTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 SMQGSIERYR RHTKDNNPAT LRSIEQNMQY LKQEAANMMK KIDLLEASKR KLMGEGLGSC 120 SIDELQRMEQ QLERSLSNVR ARKTQFFREQ VEQLKEKEKA LVDENARLSE KCGMQSQPAT 180 RGENQPQSYT ESSPSSDVET ELFIGLPDTR TKRIPTQA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	8e-97	MIKC_MADS family protein