PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334846.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 369aa MW: 42088.9 Da PI: 6.7055

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.0005	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_027334846.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	15.8	3.9e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk F ++s LkrH H XP_027334846.1 106 FVCHyeGCGKKFLDSSKLKRHFLIH 130 89*******************8877 PP
3	zf-C2H2	21.7	5.3e-07	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH XP_027334846.1 136 FVCPheGCGKAFSLDFNLRSHMKTH 160 89**********************9 PP
4	zf-C2H2	17.8	9.3e-06	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H XP_027334846.1 166 HICPypDCGKRYAHEYKLKNHIASH 190 679999*****************96 PP
5	zf-C2H2	13	0.00031	229	254	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+++ H XP_027334846.1 229 YACPyeGCEKAYIHEYKLKLHLKReH 254 89*********************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
METHFNHTLF DRRPFLKSKA PAVKWVKEWV PQDVVATGGK CMLLRWVTED TIKALKEKEK 60 EPSAPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQFVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE 180 YKLKNHIASH HEKNASVDMA KYTPPSEKQT KATKPSGGTY GSASSDRPYA CPYEGCEKAY 240 IHEYKLKLHL KREHPGHDEN AVHALANADN EMDEASDQDA YGAKRSNGKS QKQNKPKPNL 300 KLPPSKISQR KGSVPTPAAL NVIKKPWPVK EETYDEDSEE TEEDRDNVED GWRYAGNNED 360 DDEETEYED

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

METHFNHTLF DRRPFLKSKA PAVKWVKEWV PQDVVATGGK CMLLRWVTED TIKALKEKEK  60
EPSAPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQFVCHY EGCGKKFLDS  120
SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE  180
YKLKNHIASH HEKNASVDMA KYTPPSEKQT KATKPSGGTY GSASSDRPYA CPYEGCEKAY  240
IHEYKLKLHL KREHPGHDEN AVHALANADN EMDEASDQDA YGAKRSNGKS QKQNKPKPNL  300
KLPPSKISQR KGSVPTPAAL NVIKKPWPVK EETYDEDSEE TEEDRDNVED GWRYAGNNED  360
DDEETEYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-144	C2H2 family protein